Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920278.1_cds_XP_016469433.1_61976
CDS Infomation

[gene=LOC107791811] [db_xref=GeneID:107791811] [protein=E3 ubiquitin-protein ligase KEG-like] [protein_id=XP_016469433.1] [location=complement(join(30741..31704,32005..32478,32566..32657,32752..33123))] [gbkey=CDS]
Sequence

ATGGCTAAAGATATCAAAGTATCTCCTTTGGCAACTTCTTTCGATTATGAGCTTTATGAC
GGAGATCCTGATCATCTTAGAACTGTTGTTGCTGCACCTACCCCACCTGGTCCTTATATT
GATCCTGCATCAATCAAACTTAGACACAGGATTGGGCGTGGATACTTCGGTGATGTTTGG
TCAGCCACACATCATCAGTCAGCTACTGATTATGATGAGAATCATGAAGTAGCTATAAAG
ATGTTACATCCTATAAATGAGGATCAAGTAAAGGCCTTCTTAAGTAAGTTAGAGGAGTTA
TGGGTAAATTTGAAATCTAAACAACTCCAAGGTGTTTGCTGGTTGCATGGCATCTCTATA
ATATCTGGAAAGATCTGTATAGCTATGAGATCGTATGAGGGGTCAATTGGTGATAAAATG
GCTCGGCTGAAAGGAGGGAAGCTTCAGTTACCTGATGTTCTTAGATATGGTATTGAATTG
GCTAAAGGAATACAAGAGTTGCATTCAATGAATGTCTTGGTTCTGAACCTTAAGGCAACT
AATTTTCTTCTGAATGAACATGACGAAGTGTTCCTTGGAGACTTTGGGATTCCGTATCTT
CTTCTTGGAGTTCAACCACCTGATTCAGATCTAGCATTAAGGCTTGGAACTCCAAACTAC
ATGGCTCCGGAACAGTGGGAGCCTGATGTTAGAGGCCCAATAACTTGCGAGACTGATGCT
TGGGGATTTGGATGCAGCATTATTGAGATGTTGACTGGTGTTCAGCCCTGGTTTGGTAAA
TCAGTCCAAGATATATATCGTTCAGTGGTGATAAACCAAGAAAAGCCACAACTTCCTGGT
GGCCTCCCCACTGCAATTGCGAATGTTCTCAATGGCTGTTTTGAGTATGATCTCCGCAAT
CGGCCTCTGATGGTGGACATTTTGCAAACATTTGAAAGCTCGCAGAATGCTGTTTATAGT
GAAGGAGAGTGGAGCGACATAGGAGGGACTCTGTCTGTTGACAAAACCAAAACGCGTGGC
TTTACCACATGGTACCTTTCGAAAGATCTTCTTCAAGTGGGAGATACTATTCGCTCGAGA
AAATTGTTGAACTCTGGAAAGTCTCAAGATTTGGCTGTGTTGGAAGGAAGTGTTGTTGGT
CTGGAGAAAGATACAGATCGAGATGGATTTGTTCTGGTACGAGTCCCCAATTTGCCAAGC
CCTCTGAGAGTAAATACATCAACCATAGAGAGAGTTACTTGTGGTTTGGCAGCTGGGGAT
TGGGTGCGTTTGGTCAATGAAAATAAGCAACACTCTTCTTTGGGTGTCCTGCACTCTGTG
CAGCGTGATGGAAATGTAAGTGTTGGTTTTTTAGGCTTAGAAACTTTATGGACAGGACAT
TCTTCTGAAGTCCAAAAGGTGGTCCCATATTTTTTGGGACAGTTTGTGCAATTGAAATCA
AATGTTGAAACTCCCCGGTTCGAATGGCCTCAGAAAAGGGGAGGGGGATGGGCTAGTGGG
AGAATATCGCAGATATTTCCCAATGGTTGTCTTCTTGTTCAATTTCCAGGAAGGATGGTG
TTTGGTGATGAACCTAATACTTTCTTGGCTGATCCAGATGAGGTGATTCAAGTGTCTTTT
GATACATGTCCTGGCATTGTTGAAAAGTATCAGCACCTTGAGGATTTTCACTGGGCTATT
CGACCACTTTCTATTGCGTTTAGCCTATTTACAGCAGTAAAGCTTGGTGTATCTGTAGGA
AAATGTATTAAATCTAAGCTGAAGAAGGACCCGAAGAATCACCAGACCTCCGGTGATGGT
CGTACTCAAGATGGTGAAGTTGGTGGCAAGTCGGCGTGGCTTCGGCCAAATGTTGCAAAT
ATCCTCTTTAAAGAAGGTGCTGCCGCTGCTACTGCTAGATAA

Peptide Sequence

PEP ID

XP_016469433.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase KEG-like [Nicotiana tabacum]
Sequence

MAKDIKVSPLATSFDYELYDGDPDHLRTVVAAPTPPGPYIDPASIKLRHRIGRGYFGDVW
SATHHQSATDYDENHEVAIKMLHPINEDQVKAFLSKLEELWVNLKSKQLQGVCWLHGISI
ISGKICIAMRSYEGSIGDKMARLKGGKLQLPDVLRYGIELAKGIQELHSMNVLVLNLKAT
NFLLNEHDEVFLGDFGIPYLLLGVQPPDSDLALRLGTPNYMAPEQWEPDVRGPITCETDA
WGFGCSIIEMLTGVQPWFGKSVQDIYRSVVINQEKPQLPGGLPTAIANVLNGCFEYDLRN
RPLMVDILQTFESSQNAVYSEGEWSDIGGTLSVDKTKTRGFTTWYLSKDLLQVGDTIRSR
KLLNSGKSQDLAVLEGSVVGLEKDTDRDGFVLVRVPNLPSPLRVNTSTIERVTCGLAAGD
WVRLVNENKQHSSLGVLHSVQRDGNVSVGFLGLETLWTGHSSEVQKVVPYFLGQFVQLKS
NVETPRFEWPQKRGGGWASGRISQIFPNGCLLVQFPGRMVFGDEPNTFLADPDEVIQVSF
DTCPGIVEKYQHLEDFHWAIRPLSIAFSLFTAVKLGVSVGKCIKSKLKKDPKNHQTSGDG
RTQDGEVGGKSAWLRPNVANILFKEGAAAATAR

Transcript Sequence

Gene sequence data has not been registered.